EnhancerDB
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  3. rs397811980[chr19:1320972]
Enhancers that have rs397811980[chr19:1320972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1302385 1328100 enh32871
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Colon (HCT116) Lung (PC-9) Pancreas
Transcript factors that have rs397811980[chr19:1320972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1320958 1320979 IRF1 JASPAR yes 112009640
chr19 1320962 1320983 IRF1 JASPAR yes 112009641
chr19 1320964 1320979 PRDM1 JASPAR yes 112009642
chr19 1320964 1320979 STAT2 JASPAR yes 112009643
chr19 1320965 1320979 SPIC JASPAR yes 112009644
chr19 1320965 1320979 STAT1 JASPAR yes 112009645
chr19 1320966 1320987 IRF1 JASPAR yes 112009646
chr19 1320967 1320982 FOXP1 JASPAR yes 112009647
chr19 1320969 1320984 FOXP1 JASPAR yes 112009648
chr19 1320971 1320986 FOXP1 JASPAR yes 112009649
chr19 1320972 1320987 FOXP1 JASPAR yes 112009650
Genes associated with rs397811980[chr19:1320972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More