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- rs397856871[chr17:33868032]
Enhancers that have rs397856871[chr17:33868032]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
33867743 |
33868178 |
vista24539 |
|
|
Transcript factors that have rs397856871[chr17:33868032]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
33867410
|
33868040
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108251330
|
|
|
chr17
|
33867531
|
33868474
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108251332
|
|
|
chr17
|
33867531
|
33868474
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108251333
|
|
|
chr17
|
33867994
|
33868370
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108251337
|
|
|
chr17
|
33867994
|
33868370
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108251338
|
|
Genes associated with rs397856871[chr17:33868032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
33426811
|
33448541
|
-
|
RAD51D
|
ENSG00000185379.16
|
33448541
|
419491
|
Esophagus
|
0.113704
|
15656
|
|
|
chr17
|
32907768
|
32966337
|
+
|
TMEM132E
|
ENSG00000181291.5
|
32907768
|
901695
|
Spleen
|
0.180152
|
15650
|
|