EnhancerDB
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  3. rs397861178[chr1:92013320]
Enhancers that have rs397861178[chr1:92013320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 92012045 92027875 enh12029
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Breast Pancreas Uterus Thymus Stomach
Transcript factors that have rs397861178[chr1:92013320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 92013313 92013323 ALX3 JASPAR yes 30699539
chr1 92013313 92013323 GSX1 JASPAR yes 30699540
chr1 92013313 92013323 GSX2 JASPAR yes 30699541
chr1 92013313 92013323 MIXL1 JASPAR yes 30699542
chr1 92013313 92013323 MNX1 JASPAR yes 30699543
chr1 92013313 92013323 NOTO JASPAR yes 30699544
chr1 92013314 92013322 ISX JASPAR yes 30699545
chr1 92013314 92013322 LMX1A JASPAR yes 30699546
chr1 92013314 92013322 LMX1B JASPAR yes 30699547
chr1 92013314 92013322 NKX6-1 JASPAR yes 30699548
chr1 92013314 92013322 NKX6-2 JASPAR yes 30699549
chr1 92013314 92013322 PRRX1 JASPAR yes 30699550
chr1 92013314 92013322 RAX2 JASPAR yes 30699551
chr1 92013314 92013322 SHOX JASPAR yes 30699552
chr1 92013314 92013322 UNCX JASPAR yes 30699553
chr1 92013314 92013322 VAX1 JASPAR yes 30699554
chr1 92013315 92013336 IRF1 JASPAR yes 30699555
chr1 92013317 92013332 FOXP1 JASPAR yes 30699556
chr1 92013318 92013333 FOXP1 JASPAR yes 30699557
chr1 92013319 92013325 TBP TRANSFAC yes 30699558
chr1 92013319 92013334 FOXP1 JASPAR yes 30699559
chr1 92013319 92013340 IRF1 JASPAR yes 30699560
chr1 92013320 92013335 FOXP1 JASPAR yes 30699561
Genes associated with rs397861178[chr1:92013320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More