EnhancerDB
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  3. rs397932678[chr2:28735555]
Enhancers that have rs397932678[chr2:28735555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28728445 28736375 enh18389
Cervix (HeLa-S3) Large Intestine Thyroid Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs397932678[chr2:28735555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28735536 28735557 IRF1 JASPAR yes 72656111
chr2 28735538 28735559 IRF1 JASPAR yes 72656114
chr2 28735542 28735563 IRF1 JASPAR yes 72656115
chr2 28735543 28735558 LEF1 JASPAR yes 72656116
chr2 28735543 28735564 IRF1 JASPAR yes 72656117
chr2 28735544 28735558 TCF7L2 JASPAR yes 72656118
chr2 28735546 28735567 IRF1 JASPAR yes 72656119
chr2 28735549 28735563 SPI1 JASPAR yes 72656120
chr2 28735549 28735570 IRF1 JASPAR yes 72656121
chr2 28735551 28735572 IRF1 JASPAR yes 72656122
chr2 28735552 28735567 FOXP1 JASPAR yes 72656123
chr2 28735554 28735569 FOXP1 JASPAR yes 72656124
chr2 28735555 28735570 FOXP1 JASPAR yes 72656125
Genes associated with rs397932678[chr2:28735555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More