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- rs397953538[chr18:56572635]
Enhancers that have rs397953538[chr18:56572635]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
56565273 |
56572995 |
enh17751 |
|
|
Transcript factors that have rs397953538[chr18:56572635]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
56572027
|
56572688
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108338688
|
|
|
chr18
|
56572194
|
56572853
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108338689
|
|
|
chr18
|
56572615
|
56572636
|
IRF1
|
JASPAR
|
yes
|
|
110990066
|
|
|
chr18
|
56572619
|
56572640
|
IRF1
|
JASPAR
|
yes
|
|
110990068
|
|
|
chr18
|
56572621
|
56572636
|
FOXP1
|
JASPAR
|
yes
|
|
110990069
|
|
|
chr18
|
56572621
|
56572642
|
IRF1
|
JASPAR
|
yes
|
|
110990070
|
|
|
chr18
|
56572623
|
56572644
|
IRF1
|
JASPAR
|
yes
|
|
110990071
|
|
|
chr18
|
56572625
|
56572646
|
IRF1
|
JASPAR
|
yes
|
|
110990072
|
|
|
chr18
|
56572627
|
56572642
|
PRDM1
|
JASPAR
|
yes
|
|
110990073
|
|
|
chr18
|
56572627
|
56572642
|
STAT2
|
JASPAR
|
yes
|
|
110990074
|
|
|
chr18
|
56572628
|
56572642
|
SPIC
|
JASPAR
|
yes
|
|
110990075
|
|
|
chr18
|
56572628
|
56572642
|
STAT1
|
JASPAR
|
yes
|
|
110990076
|
|
|
chr18
|
56572629
|
56572650
|
IRF1
|
JASPAR
|
yes
|
|
110990077
|
|
|
chr18
|
56572630
|
56572645
|
FOXP1
|
JASPAR
|
yes
|
|
110990078
|
|
|
chr18
|
56572630
|
56572651
|
IRF1
|
JASPAR
|
yes
|
|
110990079
|
|
|
chr18
|
56572632
|
56572647
|
FOXP1
|
JASPAR
|
yes
|
|
110990080
|
|
|
chr18
|
56572634
|
56572649
|
FOXP1
|
JASPAR
|
yes
|
|
110990081
|
|
|
chr18
|
56572635
|
56572650
|
FOXP1
|
JASPAR
|
yes
|
|
110990082
|
|
Genes associated with rs397953538[chr18:56572635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |