EnhancerDB
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  3. rs397979652[chr1:24589994]
Enhancers that have rs397979652[chr1:24589994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24587365 24595994 enh11618
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs397979652[chr1:24589994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24589978 24589999 IRF1 JASPAR yes 27492936
chr1 24589980 24589995 STAT2 JASPAR yes 27492937
chr1 24589982 24590003 IRF1 JASPAR yes 27492938
chr1 24589983 24590004 IRF1 JASPAR yes 27492939
chr1 24589987 24590007 RREB1 JASPAR yes 27492940
chr1 24589988 24590009 IRF1 JASPAR yes 27492941
chr1 24589989 24589995 TCF4 TRANSFAC yes 27492942
chr1 24589989 24590004 FOXP1 JASPAR yes 27492943
chr1 24589990 24590001 FOXP2 JASPAR yes 27492944
chr1 24589990 24590002 FOXC2 JASPAR yes 27492945
chr1 24589990 24590010 RREB1 JASPAR yes 27492946
chr1 24589992 24590012 RREB1 JASPAR yes 27492947
Genes associated with rs397979652[chr1:24589994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More