EnhancerDB
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  3. rs41266185[chr1:28837012]
Enhancers that have rs41266185[chr1:28837012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs41266185[chr1:28837012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28837001 28837016 SCRT1 JASPAR yes 27773880
chr1 28837002 28837012 ID4 JASPAR yes 27773881
chr1 28837002 28837012 TCF3 JASPAR yes 27773882
chr1 28837002 28837012 TCF4 JASPAR yes 27773883
chr1 28837003 28837012 SNAI2 JASPAR yes 27773884
chr1 28837003 28837016 SCRT2 JASPAR yes 27773885
Genes associated with rs41266185[chr1:28837012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 28696114 28826881 + PHACTR4 ENSG00000204138.8 28696114 10131 Heart 0.0463908 412