EnhancerDB
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  3. rs4506429[chr1:180106573]
Enhancers that have rs4506429[chr1:180106573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180090529 180108295 enh12420
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs4506429[chr1:180106573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180106571 180106582 CDX2 JASPAR yes 33503233
chr1 180106572 180106583 HOXA10 JASPAR yes 33503234
chr1 180106572 180106583 HOXC11 JASPAR yes 33503235
chr1 180106572 180106583 HOXC12 JASPAR yes 33503236
chr1 180106572 180106583 HOXD12 JASPAR yes 33503237
chr1 180106573 180106582 CDX1 JASPAR yes 33503238
chr1 180106573 180106583 HOXA13 JASPAR yes 33503239
chr1 180106573 180106583 HOXC10 JASPAR yes 33503240
chr1 180106573 180106583 HOXD11 JASPAR yes 33503241
chr1 180106573 180106583 HOXD13 JASPAR yes 33503242
Genes associated with rs4506429[chr1:180106573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More