EnhancerDB
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  3. rs4652558[chr1:181049418]
Enhancers that have rs4652558[chr1:181049418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181040771 181050755 enh12429
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs4652558[chr1:181049418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181049007 181049592 TCF7L2 GTRD no Colon (HCT116) 21354218
chr1 181049413 181049428 FOXP1 JASPAR yes 33551222
chr1 181049416 181049431 FOXA1 JASPAR yes 33551223
chr1 181049417 181049429 FOXI1 JASPAR yes 33551224
chr1 181049417 181049432 FOXP1 JASPAR yes 33551225
chr1 181049418 181049430 FOXC2 JASPAR yes 33551226
chr1 181049418 181049432 FOXF2 JASPAR yes 33551227
chr1 181049418 181049432 ONECUT2 JASPAR yes 33551228
chr1 181049418 181049432 ONECUT3 JASPAR yes 33551229
Genes associated with rs4652558[chr1:181049418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More