EnhancerDB
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  3. rs4794080[chr17:48036773]
Enhancers that have rs4794080[chr17:48036773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48033740 48039195 enh17212
Placenta Cervix (HeLa-S3) Lung (PC-9) Colon (HCT116)
Transcript factors that have rs4794080[chr17:48036773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48036530 48038164 TCF7L2 GTRD no Colon (HCT116) 21769353
chr17 48036571 48037919 TCF7L2 GTRD no Colon (HCT116) 21769354
chr17 48036613 48037363 ZNF274 GTRD no Cervix (HeLa-S3) 21769355
chr17 48036633 48037939 TCF7L2 GTRD no Colon (HCT116) 21769356
chr17 48036710 48038355 TCF7L2 GTRD no Colon (HCT116) 21769357
chr17 48036760 48036773 POU2F2 JASPAR yes 54673304
chr17 48036760 48036774 POU1F1 JASPAR yes 54673305
chr17 48036761 48036773 POU3F1 JASPAR yes 54673306
chr17 48036761 48036773 POU3F2 JASPAR yes 54673307
chr17 48036761 48036774 POU3F3 JASPAR yes 54673308
chr17 48036762 48036774 POU2F1 JASPAR yes 54673310
chr17 48036769 48036782 ZBTB18 JASPAR yes 54673317
chr17 48036770 48036784 POU1F1 JASPAR yes 54673318
chr17 48036771 48036783 POU3F1 JASPAR yes 54673319
chr17 48036771 48036783 POU3F2 JASPAR yes 54673320
chr17 48036771 48036784 POU3F3 JASPAR yes 54673321
chr17 48036772 48036784 POU2F1 JASPAR yes 54673322
chr17 48036773 48036782 POU3F4 JASPAR yes 54673323
chr17 48036773 48036782 POU5F1B JASPAR yes 54673324
Genes associated with rs4794080[chr17:48036773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 204802 Ovary 0.0315943 16028