EnhancerDB
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  3. rs4908580[chr1:7015859]
Enhancers that have rs4908580[chr1:7015859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7013565 7031395 enh36
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Muscle (A673) Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs4908580[chr1:7015859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7015849 7015866 RXRA JASPAR yes 26433141
chr1 7015851 7015866 HNF4G JASPAR yes 26433142
chr1 7015851 7015866 NR2C2 JASPAR yes 26433143
chr1 7015852 7015866 RXRB JASPAR yes 26433144
chr1 7015852 7015866 RXRG JASPAR yes 26433145
chr1 7015852 7015867 HNF4A JASPAR yes 26433146
chr1 7015857 7015870 NR2F1 JASPAR yes 26433148
Genes associated with rs4908580[chr1:7015859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More