EnhancerDB
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  3. rs4924418[chr15:40389196]
Enhancers that have rs4924418[chr15:40389196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4924418[chr15:40389196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40389189 40389210 ZNF263 JASPAR yes 22929118
chr15 40389190 40389201 E2F6 JASPAR yes 22929119
chr15 40389190 40389211 ZNF263 JASPAR yes 22929120
chr15 40389191 40389212 ZNF263 JASPAR yes 22929121
chr15 40389193 40389214 IRF1 JASPAR yes 22929122
Genes associated with rs4924418[chr15:40389196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 41056218 41059906 + GCHFR ENSG00000137880.4 41056218 667022 Heart 0.0549464 13819
chr15 40886218 40956540 + CASC5 ENSG00000137812.15 40886218 497022 Uterus 0.0130764 13816