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- SNP
- rs494787[chr18:569517]
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
566805 |
575035 |
enh92763 |
|
|
Transcript factors that have rs494787[chr18:569517]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
568178
|
569520
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21802197
|
|
|
chr18
|
569504
|
569519
|
FOXP1
|
JASPAR
|
yes
|
|
108603627
|
|
|
chr18
|
569508
|
569523
|
LEF1
|
JASPAR
|
yes
|
|
108603628
|
|
|
chr18
|
569513
|
569519
|
SOX10
|
JASPAR
|
yes
|
|
108603629
|
|
|
chr18
|
569516
|
569521
|
ETS2
|
TRANSFAC
|
yes
|
|
108603630
|
|
|
chr18
|
569517
|
569533
|
POU4F2
|
JASPAR
|
yes
|
|
108603631
|
|
Genes associated with rs494787[chr18:569517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |