EnhancerDB
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  3. rs4999623[chr1:202819242]
Enhancers that have rs4999623[chr1:202819242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202811485 202823655 enh12544
Spleen Placenta Epithelial (MCF-7)
Transcript factors that have rs4999623[chr1:202819242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202819227 202819243 POU4F2 JASPAR yes 34593867
chr1 202819227 202819243 POU4F3 JASPAR yes 34593868
chr1 202819229 202819243 POU4F1 JASPAR yes 34593873
chr1 202819229 202819244 HNF1A JASPAR yes 34593874
chr1 202819230 202819245 HNF1A JASPAR yes 34593883
chr1 202819231 202819242 PHOX2A JASPAR yes 34593894
chr1 202819231 202819242 PROP1 JASPAR yes 34593895
chr1 202819231 202819245 POU4F1 JASPAR yes 34593896
chr1 202819231 202819247 POU4F2 JASPAR yes 34593897
chr1 202819231 202819247 POU4F3 JASPAR yes 34593898
chr1 202819232 202819242 PAX3 JASPAR yes 34593899
chr1 202819232 202819242 PAX7 JASPAR yes 34593900
chr1 202819232 202819243 PHOX2A JASPAR yes 34593901
chr1 202819232 202819243 PROP1 JASPAR yes 34593902
chr1 202819233 202819247 POU4F1 JASPAR yes 34593903
chr1 202819233 202819248 HNF1A JASPAR yes 34593904
chr1 202819234 202819244 GSX1 JASPAR yes 34593905
chr1 202819234 202819244 GSX2 JASPAR yes 34593906
chr1 202819234 202819244 LHX2 JASPAR yes 34593907
chr1 202819234 202819244 LHX6 JASPAR yes 34593908
chr1 202819234 202819244 MNX1 JASPAR yes 34593909
chr1 202819234 202819244 NOTO JASPAR yes 34593910
chr1 202819234 202819244 POU6F1 JASPAR yes 34593911
chr1 202819234 202819244 RAX JASPAR yes 34593912
chr1 202819234 202819249 HNF1A JASPAR yes 34593913
chr1 202819235 202819243 ISX JASPAR yes 34593914
chr1 202819235 202819243 LMX1A JASPAR yes 34593915
chr1 202819235 202819243 LMX1B JASPAR yes 34593916
chr1 202819235 202819243 NKX6-1 JASPAR yes 34593917
chr1 202819235 202819243 NKX6-2 JASPAR yes 34593918
chr1 202819235 202819243 PRRX1 JASPAR yes 34593919
chr1 202819235 202819243 RAX2 JASPAR yes 34593920
chr1 202819235 202819243 SHOX JASPAR yes 34593921
chr1 202819235 202819243 UNCX JASPAR yes 34593922
chr1 202819235 202819243 VAX1 JASPAR yes 34593923
chr1 202819235 202819246 PHOX2A JASPAR yes 34593924
chr1 202819235 202819246 PROP1 JASPAR yes 34593925
chr1 202819235 202819249 POU4F1 JASPAR yes 34593926
chr1 202819235 202819251 POU4F2 JASPAR yes 34593927
chr1 202819235 202819251 POU4F3 JASPAR yes 34593928
chr1 202819236 202819246 PAX3 JASPAR yes 34593929
chr1 202819236 202819246 PAX7 JASPAR yes 34593930
chr1 202819236 202819247 PHOX2A JASPAR yes 34593931
chr1 202819236 202819247 PROP1 JASPAR yes 34593932
chr1 202819238 202819248 GSX1 JASPAR yes 34593933
chr1 202819238 202819248 GSX2 JASPAR yes 34593934
chr1 202819238 202819248 LHX2 JASPAR yes 34593935
chr1 202819238 202819248 LHX6 JASPAR yes 34593936
chr1 202819238 202819248 MNX1 JASPAR yes 34593937
chr1 202819238 202819248 NOTO JASPAR yes 34593938
chr1 202819238 202819248 POU6F1 JASPAR yes 34593939
chr1 202819238 202819248 RAX JASPAR yes 34593940
chr1 202819239 202819247 ISX JASPAR yes 34593941
chr1 202819239 202819247 LMX1A JASPAR yes 34593942
chr1 202819239 202819247 LMX1B JASPAR yes 34593943
chr1 202819239 202819247 NKX6-1 JASPAR yes 34593944
chr1 202819239 202819247 NKX6-2 JASPAR yes 34593945
chr1 202819239 202819247 PRRX1 JASPAR yes 34593946
chr1 202819239 202819247 RAX2 JASPAR yes 34593947
chr1 202819239 202819247 SHOX JASPAR yes 34593948
chr1 202819239 202819247 UNCX JASPAR yes 34593949
chr1 202819239 202819247 VAX1 JASPAR yes 34593950
chr1 202819239 202819252 DUXA JASPAR yes 34593951
chr1 202819239 202819253 POU4F1 JASPAR yes 34593952
chr1 202819240 202819250 PAX3 JASPAR yes 34593953
chr1 202819240 202819250 PAX7 JASPAR yes 34593954
chr1 202819240 202819251 DUX4 JASPAR yes 34593955
chr1 202819240 202819251 PHOX2A JASPAR yes 34593956
chr1 202819240 202819251 PROP1 JASPAR yes 34593957
chr1 202819242 202819256 POU4F1 JASPAR yes 34593958
Genes associated with rs4999623[chr1:202819242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More