EnhancerDB
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  3. rs5017331[chr16:27179227]
Enhancers that have rs5017331[chr16:27179227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27178861 27194637 enh31749
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs5017331[chr16:27179227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27179030 27180256 ZNF274 GTRD no Cervix (HeLa-S3) 21700453
chr16 27179071 27180223 ZNF143 GTRD no Epithelial (MCF-7) 21700454
chr16 27179091 27179969 ZNF143 GTRD no Epithelial (MCF-7) 21700455
chr16 27179093 27180120 ZNF143 GTRD no Epithelial (MCF-7) 21700456
chr16 27179106 27180001 ZNF143 GTRD no Epithelial (MCF-7) 21700457
chr16 27179112 27180128 ZNF143 GTRD no Epithelial (MCF-7) 21700458
chr16 27179117 27180047 ZNF143 GTRD no Epithelial (MCF-7) 21700459
chr16 27179117 27180231 ZNF274 GTRD no Cervix (HeLa-S3) 21700460
chr16 27179123 27179857 ZNF143 GTRD no Epithelial (MCF-7) 21700461
chr16 27179124 27180040 ZNF143 GTRD no Epithelial (MCF-7) 21700462
chr16 27179128 27180138 ZNF143 GTRD no Epithelial (MCF-7) 21700463
chr16 27179150 27180076 ZNF274 GTRD no Cervix (HeLa-S3) 21700464
chr16 27179197 27180133 TCF7L2 GTRD no Colon (HCT116) 21700465
chr16 27179214 27179896 TCF7L2 GTRD no Colon (HCT116) 21700466
chr16 27179224 27179234 HOXB13 JASPAR yes 10173849
chr16 27179224 27179234 HOXD13 JASPAR yes 10173850
chr16 27179224 27179235 HOXA10 JASPAR yes 10173851
chr16 27179225 27179235 ALX3 JASPAR yes 10173852
chr16 27179225 27179235 EMX1 JASPAR yes 10173853
chr16 27179225 27179235 EMX2 JASPAR yes 10173854
chr16 27179225 27179235 ESX1 JASPAR yes 10173855
chr16 27179225 27179235 GBX2 JASPAR yes 10173856
chr16 27179225 27179235 GSX1 JASPAR yes 10173857
chr16 27179225 27179235 GSX2 JASPAR yes 10173858
chr16 27179225 27179235 HESX1 JASPAR yes 10173859
chr16 27179225 27179235 HOXB2 JASPAR yes 10173860
chr16 27179225 27179235 HOXB3 JASPAR yes 10173861
chr16 27179225 27179235 LBX2 JASPAR yes 10173862
chr16 27179225 27179235 LHX2 JASPAR yes 10173863
chr16 27179225 27179235 LHX6 JASPAR yes 10173864
chr16 27179225 27179235 MEOX1 JASPAR yes 10173865
chr16 27179225 27179235 MEOX2 JASPAR yes 10173866
chr16 27179225 27179235 MIXL1 JASPAR yes 10173867
chr16 27179225 27179235 MNX1 JASPAR yes 10173868
chr16 27179225 27179235 NOTO JASPAR yes 10173869
chr16 27179225 27179235 RAX JASPAR yes 10173870
chr16 27179226 27179234 BSX JASPAR yes 10173871
chr16 27179226 27179234 DLX6 JASPAR yes 10173872
chr16 27179226 27179234 EN1 JASPAR yes 10173873
chr16 27179226 27179234 ISX JASPAR yes 10173874
chr16 27179226 27179234 LBX1 JASPAR yes 10173875
chr16 27179226 27179234 LHX9 JASPAR yes 10173876
chr16 27179226 27179234 LMX1A JASPAR yes 10173877
chr16 27179226 27179234 LMX1B JASPAR yes 10173878
chr16 27179226 27179234 NKX6-1 JASPAR yes 10173879
chr16 27179226 27179234 NKX6-2 JASPAR yes 10173880
chr16 27179226 27179234 PAX4 JASPAR yes 10173881
chr16 27179226 27179234 PDX1 JASPAR yes 10173882
chr16 27179226 27179234 PRRX1 JASPAR yes 10173883
chr16 27179226 27179234 RAX2 JASPAR yes 10173884
chr16 27179226 27179234 SHOX JASPAR yes 10173885
chr16 27179226 27179234 UNCX JASPAR yes 10173886
chr16 27179226 27179234 VAX1 JASPAR yes 10173887
chr16 27179226 27179234 VAX2 JASPAR yes 10173888
chr16 27179226 27179234 VSX1 JASPAR yes 10173889
chr16 27179226 27179234 VSX2 JASPAR yes 10173890
chr16 27179226 27179236 POU6F2 JASPAR yes 10173891
Genes associated with rs5017331[chr16:27179227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More