EnhancerDB
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  3. rs516140[chr1:28437824]
Enhancers that have rs516140[chr1:28437824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28435205 28444028 enh11675
Bone Marrow (K562) Prostate (PC-3) Large Intestine Astrocyte Blood (GM12878) Placenta Lung (PC-9)
chr1 28437697 28438098 vista977
VISTA
Transcript factors that have rs516140[chr1:28437824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802637
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802638
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802639
chr1 28437817 28437825 FOXC1 JASPAR yes 27741817
chr1 28437817 28437825 FOXC1 JASPAR yes 118261462
chr1 28437822 28437838 SOX8 JASPAR yes 27741818
chr1 28437822 28437838 SOX8 JASPAR yes 118261463
Genes associated with rs516140[chr1:28437824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More