EnhancerDB
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  3. rs527244380[chr1:234630212]
Enhancers that have rs527244380[chr1:234630212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs527244380[chr1:234630212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234629721 234630241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393309
chr1 234629730 234630246 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393310
chr1 234629730 234630250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393311
chr1 234629805 234630395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393314
chr1 234630205 234630224 CTCF JASPAR yes 36278576
chr1 234630210 234630223 SCRT2 JASPAR yes 36278577
Genes associated with rs527244380[chr1:234630212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More