EnhancerDB
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Enhancers that have rs528154370[chr12:54201396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54186005 54202829 enh80200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs528154370[chr12:54201396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54199928 54202112 ZNF274 GTRD no Cervix (HeLa-S3) 21549812
chr12 54200013 54201921 ZNF274 GTRD no Cervix (HeLa-S3) 21549813
chr12 54200350 54202094 ZNF143 GTRD no Epithelial (MCF-7) 21549815
chr12 54200626 54202075 ZNF143 GTRD no Epithelial (MCF-7) 21549816
chr12 54200640 54202075 ZNF274 GTRD no Cervix (HeLa-S3) 21549817
chr12 54200832 54201897 ZNF143 GTRD no Epithelial (MCF-7) 21549818
chr12 54200866 54201900 ZNF143 GTRD no Epithelial (MCF-7) 21549819
chr12 54200965 54201825 ZNF143 GTRD no Epithelial (MCF-7) 21549820
chr12 54200965 54201909 ZNF143 GTRD no Epithelial (MCF-7) 21549821
chr12 54201028 54201897 ZNF143 GTRD no Epithelial (MCF-7) 21549822
chr12 54201061 54201885 ZNF274 GTRD no Liver (HepG2) 21549823
chr12 54201098 54201831 ZNF274 GTRD no Liver (HepG2) 21549824
chr12 54201099 54201809 ZNF274 GTRD no Cervix (HeLa-S3) 21549825
chr12 54201100 54201771 ZNF274 GTRD no Cervix (HeLa-S3) 21549826
chr12 54201114 54201802 ZNF274 GTRD no Cervix (HeLa-S3) 21549827
chr12 54201117 54201843 ZNF274 GTRD no Liver (HepG2) 21549828
chr12 54201132 54201911 ZNF143 GTRD no Epithelial (MCF-7) 21549829
chr12 54201152 54201929 ZNF143 GTRD no Epithelial (MCF-7) 21549830
chr12 54201189 54201773 ZNF143 GTRD no Epithelial (MCF-7) 21549831
chr12 54201199 54201816 ZNF274 GTRD no Liver (HepG2) 21549832
chr12 54201215 54201755 ZNF274 GTRD no Cervix (HeLa-S3) 21549833
chr12 54201224 54201886 ZNF143 GTRD no Epithelial (MCF-7) 21549834
chr12 54201228 54201916 ZNF143 GTRD no Epithelial (MCF-7) 21549835
chr12 54201232 54201733 ZNF143 GTRD no Epithelial (MCF-7) 21549836
chr12 54201277 54201699 ZNF274 GTRD no Liver (HepG2) 21549837
chr12 54201279 54201920 ZNF143 GTRD no Epithelial (MCF-7) 21549838
chr12 54201282 54201823 ZNF274 GTRD no Cervix (HeLa-S3) 21549839
chr12 54201282 54201969 ZNF143 GTRD no Epithelial (MCF-7) 21549840
chr12 54201283 54201758 ZNF274 GTRD no Liver (HepG2) 21549841
chr12 54201284 54201669 ZNF274 GTRD no Cervix (HeLa-S3) 21549842
chr12 54201288 54201765 ZNF274 GTRD no Liver (HepG2) 21549843
chr12 54201294 54201859 ZNF274 GTRD no Liver (HepG2) 21549844
chr12 54201316 54201743 ZNF274 GTRD no Liver (HepG2) 21549845
chr12 54201328 54201911 ZNF143 GTRD no Epithelial (MCF-7) 21549846
chr12 54201364 54201658 ZNF274 GTRD no Liver (HepG2) 21549847
chr12 54201382 54201602 ZNF274 GTRD no Liver (HepG2) 21549848
chr12 54201384 54201404 PPARG JASPAR yes 121010221
chr12 54201391 54201404 ZBTB18 JASPAR yes 121010222
Genes associated with rs528154370[chr12:54201396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More