EnhancerDB
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  3. rs533556359[chr5:172728123]
Enhancers that have rs533556359[chr5:172728123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs533556359[chr5:172728123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172728103 172728124 IRF1 JASPAR yes 67865528
chr5 172728106 172728127 ZNF263 JASPAR yes 67865530
chr5 172728107 172728128 ZNF263 JASPAR yes 67865531
chr5 172728109 172728130 IRF1 JASPAR yes 67865532
chr5 172728110 172728131 ZNF263 JASPAR yes 67865533
chr5 172728111 172728126 PRDM1 JASPAR yes 67865534
chr5 172728111 172728126 STAT2 JASPAR yes 67865535
chr5 172728112 172728126 STAT1 JASPAR yes 67865536
chr5 172728113 172728134 ZNF263 JASPAR yes 67865537
chr5 172728114 172728129 FOXP1 JASPAR yes 67865538
chr5 172728115 172728136 ZNF263 JASPAR yes 67865539
chr5 172728119 172728140 ZNF263 JASPAR yes 67865540
chr5 172728122 172728143 IRF1 JASPAR yes 67865541
chr5 172728122 172728143 ZNF263 JASPAR yes 67865542
Genes associated with rs533556359[chr5:172728123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More