EnhancerDB
  1. Home
  2. SNP
  3. rs533856586[chr6:109158971]
Enhancers that have rs533856586[chr6:109158971]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109150331 109161415 enh23484
Brain (SK-N-MC) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Blood (T-cell)
chr6 109158885 109159026 vista53055
VISTA
Transcript factors that have rs533856586[chr6:109158971]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109158957 109158972 SCRT1 JASPAR yes 70414592
chr6 109158957 109158972 SCRT1 JASPAR yes 104209879
chr6 109158969 109158973 YY1 TRANSFAC yes 70414593
chr6 109158969 109158973 YY1 TRANSFAC yes 104209880
chr6 109158970 109158980 HOXA13 JASPAR yes 70414594
chr6 109158970 109158980 HOXB13 JASPAR yes 70414595
chr6 109158970 109158980 HOXC10 JASPAR yes 70414596
chr6 109158970 109158980 HOXD13 JASPAR yes 70414597
chr6 109158970 109158980 HOXA13 JASPAR yes 104209881
chr6 109158970 109158980 HOXB13 JASPAR yes 104209882
chr6 109158970 109158980 HOXC10 JASPAR yes 104209883
chr6 109158970 109158980 HOXD13 JASPAR yes 104209884
chr6 109158970 109158981 HOXA10 JASPAR yes 70414598
chr6 109158970 109158981 HOXA10 JASPAR yes 104209885
chr6 109158971 109158980 CDX1 JASPAR yes 70414599
chr6 109158971 109158980 CDX1 JASPAR yes 104209886
chr6 109158971 109158982 CDX2 JASPAR yes 70414600
chr6 109158971 109158982 CDX2 JASPAR yes 104209887
Genes associated with rs533856586[chr6:109158971], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More