EnhancerDB
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  3. rs534077905[chr1:116680411]
Enhancers that have rs534077905[chr1:116680411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116679592 116684146 enh574
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs534077905[chr1:116680411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116677802 116681372 ZNF274 GTRD no Bone Marrow (K562) 21331495
chr1 116677990 116683628 ZNF274 GTRD no Bone Marrow (K562) 21331496
chr1 116678079 116683134 ZNF274 GTRD no Bone Marrow (K562) 21331497
chr1 116678198 116681996 ZNF274 GTRD no Bone Marrow (K562) 21331498
chr1 116678371 116683461 ZNF274 GTRD no Bone Marrow (K562) 21331499
chr1 116678817 116680417 ZNF274 GTRD no Bone Marrow (K562) 21331500
chr1 116678904 116680458 ZNF274 GTRD no Bone Marrow (K562) 21331505
chr1 116678944 116680499 ZNF274 GTRD no Bone Marrow (K562) 21331507
chr1 116678968 116680424 ZNF274 GTRD no Bone Marrow (K562) 21331508
chr1 116678998 116680476 ZNF274 GTRD no Bone Marrow (K562) 21331512
chr1 116679060 116680442 ZNF274 GTRD no Bone Marrow (K562) 21331517
chr1 116679661 116680419 ZNF274 GTRD no Bone Marrow (K562) 21331542
chr1 116680408 116680419 CDX2 JASPAR yes 31775915
chr1 116680409 116680420 HOXA10 JASPAR yes 31775916
chr1 116680409 116680420 HOXD12 JASPAR yes 31775917
chr1 116680410 116680419 CDX1 JASPAR yes 31775918
chr1 116680410 116680420 HOXA13 JASPAR yes 31775919
chr1 116680410 116680420 HOXB13 JASPAR yes 31775920
chr1 116680410 116680420 HOXD13 JASPAR yes 31775921
Genes associated with rs534077905[chr1:116680411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More