EnhancerDB
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  3. rs534387569[chr19:6800648]
Enhancers that have rs534387569[chr19:6800648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6776269 6806348 enh4990
Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Thymus Heart
Transcript factors that have rs534387569[chr19:6800648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6799439 6802203 ZNF274 GTRD no Blood (GM12878) 108380059
chr19 6799518 6802202 ZNF274 GTRD no Blood (GM12878) 108380060
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380061
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380062
chr19 6799792 6804117 ZNF274 GTRD no Blood (GM12878) 108380063
chr19 6800343 6802151 ZNF274 GTRD no Blood (GM12878) 108380064
chr19 6800365 6802246 ZNF274 GTRD no Blood (GM12878) 108380065
chr19 6800569 6802257 ZBTB33 GTRD no Lung (A549) 108380066
chr19 6800606 6802188 ZBTB33 GTRD no Lung (A549) 108380067
chr19 6800628 6802215 ZBTB33 GTRD no Lung (A549) 108380068
chr19 6800629 6800649 RREB1 JASPAR yes 112291490
chr19 6800630 6800651 IRF1 JASPAR yes 112291491
chr19 6800631 6800651 RREB1 JASPAR yes 112291494
chr19 6800636 6800651 FOXP1 JASPAR yes 112291498
chr19 6800636 6800656 RREB1 JASPAR yes 112291499
chr19 6800636 6800657 IRF1 JASPAR yes 112291500
chr19 6800643 6800649 TCF4 TRANSFAC yes 112291501
chr19 6800643 6800658 FOXP1 JASPAR yes 112291502
chr19 6800644 6800655 FOXP2 JASPAR yes 112291503
chr19 6800644 6802192 ZBTB33 GTRD no Lung (A549) 108380069
Genes associated with rs534387569[chr19:6800648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More