EnhancerDB
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  3. rs535616484[chr12:52624785]
Enhancers that have rs535616484[chr12:52624785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52624687 52625139 vista13470
VISTA
Transcript factors that have rs535616484[chr12:52624785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52624061 52624967 POLR2A UCSC Txn Factor no Conserved 108033776
chr12 52624061 52624967 POLR2A UCSC Txn Factor no Conserved 108033777
chr12 52624061 52625085 EP300 UCSC Txn Factor no Conserved 108033778
chr12 52624061 52625085 EP300 UCSC Txn Factor no Conserved 108033779
chr12 52624452 52624870 ZNF143 GTRD no Epithelial (MCF-7) 108033807
chr12 52624453 52625113 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033808
chr12 52624581 52624985 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033809
chr12 52624637 52624967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033810
chr12 52624662 52625322 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033811
chr12 52624697 52625073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033812
chr12 52624712 52625176 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033813
chr12 52624716 52625100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033814
chr12 52624754 52625124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033815
chr12 52624755 52625085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033816
chr12 52624784 52624796 GLI2 JASPAR yes 82406957
Genes associated with rs535616484[chr12:52624785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More