EnhancerDB
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  3. rs536446800[chr5:172731960]
Enhancers that have rs536446800[chr5:172731960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs536446800[chr5:172731960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172731952 172731967 ZIC3 JASPAR yes 67866271
chr5 172731952 172731967 ZIC4 JASPAR yes 67866272
chr5 172731953 172731967 ZIC1 JASPAR yes 67866273
chr5 172731954 172731965 GCM1 JASPAR yes 67866274
chr5 172731959 172731972 SMAD2 JASPAR yes 67866275
Genes associated with rs536446800[chr5:172731960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More