EnhancerDB
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  3. rs538168490[chr17:62646465]
Enhancers that have rs538168490[chr17:62646465]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62641739 62653806 enh32280
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs538168490[chr17:62646465]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62646446 62646466 RREB1 JASPAR yes 55307569
chr17 62646448 62646468 RREB1 JASPAR yes 55307570
chr17 62646453 62646468 FOXP1 JASPAR yes 55307572
chr17 62646453 62646473 RREB1 JASPAR yes 55307573
chr17 62646453 62646474 IRF1 JASPAR yes 55307574
chr17 62646454 62646475 IRF1 JASPAR yes 55307575
chr17 62646459 62646480 IRF1 JASPAR yes 55307576
chr17 62646460 62646466 TCF4 TRANSFAC yes 55307577
chr17 62646460 62646475 FOXP1 JASPAR yes 55307578
chr17 62646460 62646481 IRF1 JASPAR yes 55307579
chr17 62646461 62646472 FOXP2 JASPAR yes 55307580
chr17 62646461 62646473 FOXC2 JASPAR yes 55307581
chr17 62646461 62646476 STAT2 JASPAR yes 55307582
chr17 62646462 62646477 FOXP1 JASPAR yes 55307583
Genes associated with rs538168490[chr17:62646465], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More