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- rs538172260[chr16:2058058]
Enhancers that have rs538172260[chr16:2058058]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2053725 |
2058088 |
enh3843 |
|
|
| chr16 |
2057818 |
2059084 |
vista21564 |
|
|
Transcript factors that have rs538172260[chr16:2058058]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2057773
|
2058349
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172152
|
|
|
chr16
|
2057940
|
2058600
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172153
|
|
|
chr16
|
2057952
|
2058408
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172154
|
|
|
chr16
|
2057985
|
2058803
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172155
|
|
|
chr16
|
2058003
|
2058359
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172156
|
|
|
chr16
|
2058020
|
2058404
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172157
|
|
|
chr16
|
2058033
|
2058437
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172158
|
|
|
chr16
|
2058047
|
2058058
|
FLI1
|
JASPAR
|
yes
|
|
9168493
|
|
|
chr16
|
2058047
|
2058058
|
FLI1
|
JASPAR
|
yes
|
|
49327312
|
|
|
chr16
|
2058049
|
2058359
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108172159
|
|
|
chr16
|
2058050
|
2058310
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172160
|
|
|
chr16
|
2058052
|
2058071
|
CTCF
|
JASPAR
|
yes
|
|
9168494
|
|
|
chr16
|
2058052
|
2058071
|
CTCF
|
JASPAR
|
yes
|
|
49327313
|
|
|
chr16
|
2058053
|
2058383
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108172161
|
|
|
chr16
|
2058053
|
2058389
|
BHLHE40
|
UCSC Txn Factor
|
no
|
Conserved
|
108172162
|
|
|
chr16
|
2058053
|
2058703
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172163
|
|
|
chr16
|
2058056
|
2058068
|
TFAP2A
|
JASPAR
|
yes
|
|
9168495
|
|
|
chr16
|
2058056
|
2058068
|
TFAP2B
|
JASPAR
|
yes
|
|
9168496
|
|
|
chr16
|
2058056
|
2058068
|
TFAP2A
|
JASPAR
|
yes
|
|
49327314
|
|
|
chr16
|
2058056
|
2058068
|
TFAP2B
|
JASPAR
|
yes
|
|
49327315
|
|
|
chr16
|
2058057
|
2058433
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172164
|
|
Genes associated with rs538172260[chr16:2058058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |