EnhancerDB
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  3. rs538238769[chr5:179454230]
Enhancers that have rs538238769[chr5:179454230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179451423 179455657 enh77785
Brain (SK-N-SH) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Pancreas
Transcript factors that have rs538238769[chr5:179454230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179454228 179454238 ALX3 JASPAR yes 68194843
chr5 179454228 179454238 EN2 JASPAR yes 68194844
chr5 179454228 179454238 ESX1 JASPAR yes 68194845
chr5 179454228 179454238 GBX1 JASPAR yes 68194846
chr5 179454228 179454238 GBX2 JASPAR yes 68194847
chr5 179454228 179454238 HESX1 JASPAR yes 68194848
chr5 179454228 179454238 LBX2 JASPAR yes 68194849
chr5 179454228 179454238 MIXL1 JASPAR yes 68194850
chr5 179454228 179454238 RAX JASPAR yes 68194851
chr5 179454229 179454233 H1TF2 TRANSFAC yes 68194852
chr5 179454229 179454233 NFE TRANSFAC yes 68194853
chr5 179454229 179454233 SRF TRANSFAC yes 68194854
chr5 179454229 179454237 BARX1 JASPAR yes 68194855
chr5 179454229 179454237 BSX JASPAR yes 68194856
chr5 179454229 179454237 EN1 JASPAR yes 68194857
chr5 179454229 179454237 ISX JASPAR yes 68194858
chr5 179454229 179454237 LHX9 JASPAR yes 68194859
chr5 179454229 179454237 MSX1 JASPAR yes 68194860
chr5 179454229 179454237 MSX2 JASPAR yes 68194861
chr5 179454229 179454237 PRRX1 JASPAR yes 68194862
chr5 179454229 179454237 RAX2 JASPAR yes 68194863
chr5 179454229 179454237 SHOX JASPAR yes 68194864
chr5 179454229 179454243 POU1F1 JASPAR yes 68194865
chr5 179454230 179454242 POU3F2 JASPAR yes 68194866
Genes associated with rs538238769[chr5:179454230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More