EnhancerDB
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  3. rs538639028[chr1:25851427]
Enhancers that have rs538639028[chr1:25851427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25843883 25852295 enh158
Colon (HCT116) Blood (Karpas-422) Pancreas Spleen Thymus
Transcript factors that have rs538639028[chr1:25851427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25851419 25851434 TFAP2A JASPAR yes 27582016
chr1 25851419 25851434 TFAP2C JASPAR yes 27582017
chr1 25851421 25851436 TFAP2A JASPAR yes 27582018
chr1 25851421 25851436 TFAP2C JASPAR yes 27582019
chr1 25851422 25851433 TFAP2A JASPAR yes 27582020
chr1 25851422 25851433 TFAP2B JASPAR yes 27582021
chr1 25851422 25851433 TFAP2C JASPAR yes 27582022
chr1 25851422 25851434 TFAP2A JASPAR yes 27582023
chr1 25851422 25851434 TFAP2B JASPAR yes 27582024
chr1 25851422 25851434 TFAP2C JASPAR yes 27582025
chr1 25851423 25851432 TFAP2A JASPAR yes 27582026
Genes associated with rs538639028[chr1:25851427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More