EnhancerDB
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  3. rs538923662[chr16:12641108]
Enhancers that have rs538923662[chr16:12641108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12630505 12654813 enh3901
Liver (HepG2) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
chr16 12641085 12641468 vista21927
VISTA
Transcript factors that have rs538923662[chr16:12641108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12640953 12641453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691369
chr16 12640953 12641453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183053
chr16 12641012 12641612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691370
chr16 12641012 12641612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183054
chr16 12641081 12641765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691371
chr16 12641081 12641765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183055
chr16 12641099 12641108 SNAI2 JASPAR yes 9589790
chr16 12641099 12641108 SNAI2 JASPAR yes 49344744
chr16 12641099 12641109 ID4 JASPAR yes 9589791
chr16 12641099 12641109 TCF3 JASPAR yes 9589792
chr16 12641099 12641109 TCF4 JASPAR yes 9589793
chr16 12641099 12641109 ID4 JASPAR yes 49344745
chr16 12641099 12641109 TCF3 JASPAR yes 49344746
chr16 12641099 12641109 TCF4 JASPAR yes 49344747
chr16 12641101 12641116 HNF4G JASPAR yes 9589794
chr16 12641101 12641116 HNF4G JASPAR yes 49344748
chr16 12641102 12641116 NR2F1 JASPAR yes 9589795
chr16 12641102 12641116 RXRB JASPAR yes 9589796
chr16 12641102 12641116 RXRG JASPAR yes 9589797
chr16 12641102 12641116 NR2F1 JASPAR yes 49344749
chr16 12641102 12641116 RXRB JASPAR yes 49344750
chr16 12641102 12641116 RXRG JASPAR yes 49344751
chr16 12641102 12641117 HNF4A JASPAR yes 9589798
chr16 12641102 12641117 HNF4A JASPAR yes 49344752
chr16 12641105 12641111 TCF4 TRANSFAC yes 9589799
chr16 12641105 12641111 TCF4 TRANSFAC yes 49344753
Genes associated with rs538923662[chr16:12641108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More