EnhancerDB
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Enhancers that have rs539093254[chr16:21530096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539093254[chr16:21530096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21529631 21530201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21696954
chr16 21529655 21530185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21696955
chr16 21529662 21530178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21696956
chr16 21529800 21530456 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21696958
chr16 21529921 21530317 ZNF274 GTRD no Liver (HepG2) 21696959
chr16 21530067 21530327 ZNF274 GTRD no Bone Marrow (K562) 21696960
chr16 21530067 21530392 ZNF143 GTRD no Epithelial (MCF-7) 21696961
chr16 21530096 21530111 MEF2A JASPAR yes 9929436
Genes associated with rs539093254[chr16:21530096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More