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- rs539331656[chr12:62644404]
Enhancers that have rs539331656[chr12:62644404]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
62639225 |
62644875 |
enh14766 |
|
|
Transcript factors that have rs539331656[chr12:62644404]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
62644310
|
62644803
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108041023
|
|
|
chr12
|
62644353
|
62644903
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
21552396
|
|
|
chr12
|
62644353
|
62644903
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108041024
|
|
|
chr12
|
62644370
|
62644837
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108041025
|
|
|
chr12
|
62644370
|
62644866
|
GATA1
|
UCSC Txn Factor
|
no
|
Conserved
|
108041026
|
|
|
chr12
|
62644398
|
62644413
|
FOXA1
|
JASPAR
|
yes
|
|
121304399
|
|
|
chr12
|
62644399
|
62644411
|
FOXI1
|
JASPAR
|
yes
|
|
121304400
|
|
|
chr12
|
62644399
|
62644414
|
FOXP1
|
JASPAR
|
yes
|
|
121304401
|
|
|
chr12
|
62644400
|
62644411
|
FOXP2
|
JASPAR
|
yes
|
|
121304402
|
|
|
chr12
|
62644400
|
62644412
|
FOXC2
|
JASPAR
|
yes
|
|
121304403
|
|
|
chr12
|
62644400
|
62644414
|
FOXF2
|
JASPAR
|
yes
|
|
121304404
|
|
|
chr12
|
62644401
|
62644917
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
21552397
|
|
|
chr12
|
62644401
|
62644917
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108041027
|
|
|
chr12
|
62644402
|
62644413
|
FOXA1
|
JASPAR
|
yes
|
|
121304405
|
|
|
chr12
|
62644404
|
62644420
|
POU4F2
|
JASPAR
|
yes
|
|
121304406
|
|
Genes associated with rs539331656[chr12:62644404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |