EnhancerDB
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  3. rs539335788[chr11:65555742]
Enhancers that have rs539335788[chr11:65555742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65555605 65556077 vista10632
VISTA
Transcript factors that have rs539335788[chr11:65555742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65550910 65556343 ZNF143 GTRD no Epithelial (MCF-7) 107981439
chr11 65552616 65556379 ZNF143 GTRD no Epithelial (MCF-7) 107981440
chr11 65553259 65556191 EZH2 UCSC Txn Factor no Conserved 107981441
chr11 65554321 65557856 TCF7L2 GTRD no Colon (HCT116) 107981442
chr11 65554581 65556405 ZNF143 GTRD no Epithelial (MCF-7) 107981443
chr11 65554755 65556275 TCF7L2 GTRD no Colon (HCT116) 107981444
chr11 65554757 65556372 ZNF274 GTRD no Cervix (HeLa-S3) 107981445
chr11 65554770 65556211 TCF7L2 GTRD no Colon (HCT116) 107981446
chr11 65554771 65556555 ZNF274 GTRD no Cervix (HeLa-S3) 107981447
chr11 65554775 65556346 TCF7L2 GTRD no Colon (HCT116) 107981448
chr11 65554784 65556397 ZNF143 GTRD no Epithelial (MCF-7) 107981449
chr11 65554808 65556556 TCF7L2 GTRD no Colon (HCT116) 107981450
chr11 65554827 65557884 ZBTB33 GTRD no Lung (A549) 107981451
chr11 65554835 65556396 ZNF143 GTRD no Epithelial (MCF-7) 107981452
chr11 65554850 65556343 ZBTB33 GTRD no Lung (A549) 107981453
chr11 65554851 65556376 ZNF274 GTRD no Cervix (HeLa-S3) 107981454
chr11 65554911 65556374 ZBTB33 GTRD no Lung (A549) 107981455
chr11 65554941 65556391 ZNF143 GTRD no Epithelial (MCF-7) 107981456
chr11 65554973 65555763 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107981457
chr11 65554976 65556344 TCF7L2 GTRD no Colon (HCT116) 107981458
chr11 65555076 65561915 ZBTB33 GTRD no Lung (A549) 107981459
chr11 65555076 65561915 ZBTB33 GTRD no Lung (A549) 107981460
chr11 65555201 65556345 ZNF143 GTRD no Epithelial (MCF-7) 107981461
chr11 65555235 65556237 ZNF143 GTRD no Epithelial (MCF-7) 107981462
chr11 65555266 65556530 ZNF143 GTRD no Epithelial (MCF-7) 107981463
chr11 65555273 65556307 ZNF143 GTRD no Epithelial (MCF-7) 107981464
chr11 65555283 65556270 ZNF143 GTRD no Epithelial (MCF-7) 107981465
chr11 65555285 65556794 ZBTB33 GTRD no Lung (A549) 107981466
chr11 65555292 65556435 ZNF143 GTRD no Epithelial (MCF-7) 107981467
chr11 65555310 65557832 ZBTB33 GTRD no Lung (A549) 107981468
chr11 65555336 65556437 ZNF143 GTRD no Epithelial (MCF-7) 107981469
chr11 65555343 65556541 ZNF143 GTRD no Epithelial (MCF-7) 107981470
chr11 65555345 65556316 ZBTB33 GTRD no Lung (A549) 107981471
chr11 65555352 65556450 ZNF143 GTRD no Epithelial (MCF-7) 107981472
chr11 65555354 65555954 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107981473
chr11 65555367 65556222 ZBTB33 GTRD no Lung (A549) 107981474
chr11 65555376 65556387 ZNF143 GTRD no Epithelial (MCF-7) 107981475
chr11 65555377 65556324 ZNF274 GTRD no Liver (HepG2) 107981476
chr11 65555379 65556379 ZNF274 GTRD no Cervix (HeLa-S3) 107981477
chr11 65555387 65556361 ZNF143 GTRD no Epithelial (MCF-7) 107981478
chr11 65555387 65556467 ZNF143 GTRD no Epithelial (MCF-7) 107981479
chr11 65555396 65556303 ZNF274 GTRD no Bone Marrow (K562) 107981480
chr11 65555401 65556191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107981481
chr11 65555417 65556337 ZNF274 GTRD no Liver (HepG2) 107981482
chr11 65555420 65556388 ZNF143 GTRD no Epithelial (MCF-7) 107981483
chr11 65555424 65556544 TCF7L2 GTRD no Colon (HCT116) 107981484
chr11 65555442 65556325 ZNF274 GTRD no Cervix (HeLa-S3) 107981485
chr11 65555447 65556287 ZNF274 GTRD no Cervix (HeLa-S3) 107981486
chr11 65555448 65556494 ZBTB33 GTRD no Brain (SK-N-SH) 107981487
chr11 65555451 65556244 ZNF274 GTRD no Cervix (HeLa-S3) 107981488
chr11 65555460 65556381 ZBTB33 GTRD no Lung (A549) 107981489
chr11 65555468 65556351 ZNF274 GTRD no Liver (HepG2) 107981490
chr11 65555471 65556260 ZNF274 GTRD no Cervix (HeLa-S3) 107981491
chr11 65555474 65556337 ZBTB33 GTRD no Brain (SK-N-SH) 107981492
chr11 65555482 65556389 ZNF274 GTRD no Bone Marrow (K562) 107981493
chr11 65555485 65556492 ZBTB33 GTRD no Brain (SK-N-SH) 107981494
chr11 65555486 65556334 ZBTB33 GTRD no Brain (SK-N-SH) 107981495
chr11 65555491 65556294 ZNF143 GTRD no Epithelial (MCF-7) 107981496
chr11 65555494 65556402 ZBTB33 GTRD no Lung (A549) 107981497
chr11 65555496 65556166 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107981498
chr11 65555504 65556362 TCF7L2 GTRD no Colon (HCT116) 107981499
chr11 65555510 65556345 ZBTB33 GTRD no Brain (SK-N-SH) 107981500
chr11 65555510 65556397 ZNF143 GTRD no Epithelial (MCF-7) 107981501
chr11 65555518 65556338 ZNF143 GTRD no Epithelial (MCF-7) 107981502
chr11 65555521 65556396 ZNF143 GTRD no Epithelial (MCF-7) 107981503
chr11 65555523 65556335 ZNF274 GTRD no Bone Marrow (K562) 107981504
chr11 65555526 65556294 ZNF274 GTRD no Cervix (HeLa-S3) 107981505
chr11 65555527 65556482 ZBTB33 GTRD no Lung (A549) 107981506
chr11 65555534 65556303 ZNF274 GTRD no Cervix (HeLa-S3) 107981507
chr11 65555535 65556254 ZNF143 GTRD no Epithelial (MCF-7) 107981508
chr11 65555537 65556272 ZNF274 GTRD no Liver (HepG2) 107981509
chr11 65555540 65556238 ZNF274 GTRD no Liver (HepG2) 107981510
chr11 65555542 65556290 ZNF274 GTRD no Cervix (HeLa-S3) 107981511
chr11 65555551 65556802 ZNF274 GTRD no Cervix (HeLa-S3) 107981512
chr11 65555552 65556407 ZBTB33 GTRD no Brain (SK-N-SH) 107981513
chr11 65555554 65556322 ZNF274 GTRD no Liver (HepG2) 107981514
chr11 65555554 65556342 ZBTB33 GTRD no Lung (A549) 107981515
chr11 65555557 65556263 ZNF274 GTRD no Liver (HepG2) 107981516
chr11 65555569 65556443 ZBTB33 GTRD no Brain (SK-N-SH) 107981517
chr11 65555572 65556448 TCF7L2 GTRD no Colon (HCT116) 107981518
chr11 65555590 65556325 ZBTB33 GTRD no Brain (SK-N-SH) 107981519
chr11 65555597 65556173 ZNF143 GTRD no Epithelial (MCF-7) 107981520
chr11 65555599 65556247 ZNF143 GTRD no Epithelial (MCF-7) 107981521
chr11 65555602 65556475 ZBTB33 GTRD no Brain (SK-N-SH) 107981522
chr11 65555608 65556427 ZBTB33 GTRD no Brain (SK-N-SH) 107981523
chr11 65555611 65556458 ZBTB33 GTRD no Brain (SK-N-SH) 107981524
chr11 65555614 65556048 ZNF274 GTRD no Blood (GM12878) 107981525
chr11 65555615 65556340 ZBTB33 GTRD no Lung (A549) 107981526
chr11 65555617 65556201 TCF7L2 GTRD no Colon (HCT116) 107981527
chr11 65555617 65556385 ZBTB33 GTRD no Brain (SK-N-SH) 107981528
chr11 65555628 65556420 ZBTB33 GTRD no Brain (SK-N-SH) 107981529
chr11 65555633 65556260 ZBTB33 GTRD no Lung (A549) 107981530
chr11 65555644 65556326 ZBTB33 GTRD no Brain (SK-N-SH) 107981531
chr11 65555646 65556246 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107981532
chr11 65555651 65556353 ZNF143 GTRD no Epithelial (MCF-7) 107981533
chr11 65555654 65556289 ZNF274 GTRD no Cervix (HeLa-S3) 107981534
chr11 65555668 65556352 ZBTB33 GTRD no Brain (SK-N-SH) 107981535
chr11 65555673 65556329 ZBTB33 GTRD no Brain (SK-N-SH) 107981536
chr11 65555676 65556335 ZNF274 GTRD no Liver (HepG2) 107981537
chr11 65555677 65556363 ZBTB33 GTRD no Brain (SK-N-SH) 107981538
chr11 65555679 65556345 ZNF274 GTRD no Bone Marrow (K562) 107981539
chr11 65555681 65556074 ZNF274 GTRD no Liver (HepG2) 107981540
chr11 65555688 65556186 ZNF274 GTRD no Bone Marrow (K562) 107981541
chr11 65555710 65556149 ZNF274 GTRD no Liver (HepG2) 107981542
chr11 65555721 65556335 ZNF274 GTRD no Cervix (HeLa-S3) 107981543
chr11 65555722 65556433 ZBTB33 GTRD no Brain (SK-N-SH) 107981544
chr11 65555728 65556088 ZNF274 GTRD no Liver (HepG2) 107981545
chr11 65555731 65555750 REST JASPAR yes 114088113
chr11 65555736 65555746 SMAD3 JASPAR yes 114088114
Genes associated with rs539335788[chr11:65555742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More