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- rs539456727[chr16:88102595]
Enhancers that have rs539456727[chr16:88102595]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88099944 |
88104558 |
enh115622 |
|
|
Transcript factors that have rs539456727[chr16:88102595]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88102508
|
88102995
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221803
|
|
|
chr16
|
88102514
|
88103023
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221804
|
|
|
chr16
|
88102528
|
88103167
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108221805
|
|
|
chr16
|
88102582
|
88102597
|
NR2C2
|
JASPAR
|
yes
|
|
12260220
|
|
|
chr16
|
88102585
|
88102595
|
SP1
|
JASPAR
|
yes
|
|
12260221
|
|
|
chr16
|
88102593
|
88102612
|
REST
|
JASPAR
|
yes
|
|
12260223
|
|
Genes associated with rs539456727[chr16:88102595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |