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- rs539562066[chr19:1110058]
Enhancers that have rs539562066[chr19:1110058]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1105365 |
1110635 |
enh107746 |
|
|
Transcript factors that have rs539562066[chr19:1110058]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1100833
|
1114469
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108349982
|
|
|
chr19
|
1110044
|
1110058
|
GLIS2
|
JASPAR
|
yes
|
|
111992971
|
|
|
chr19
|
1110044
|
1110058
|
GLIS3
|
JASPAR
|
yes
|
|
111992972
|
|
|
chr19
|
1110049
|
1110065
|
ZNF143
|
JASPAR
|
yes
|
|
111992973
|
|
Genes associated with rs539562066[chr19:1110058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |