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- rs539599107[chr1:223363321]
Enhancers that have rs539599107[chr1:223363321]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
223360465 |
223366995 |
enh27569 |
|
|
Transcript factors that have rs539599107[chr1:223363321]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
223362332
|
223364576
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107872948
|
|
|
chr1
|
223362332
|
223364576
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107872949
|
|
|
chr1
|
223362696
|
223363892
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872950
|
|
|
chr1
|
223362857
|
223364914
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872951
|
|
|
chr1
|
223362878
|
223365310
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872952
|
|
|
chr1
|
223362931
|
223364305
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872953
|
|
|
chr1
|
223362939
|
223364961
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872954
|
|
|
chr1
|
223362948
|
223363833
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872955
|
|
|
chr1
|
223362950
|
223364734
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872956
|
|
|
chr1
|
223362975
|
223364479
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872957
|
|
|
chr1
|
223362983
|
223365055
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872958
|
|
|
chr1
|
223362989
|
223365047
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872959
|
|
|
chr1
|
223362991
|
223364867
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872960
|
|
|
chr1
|
223362998
|
223364877
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107872961
|
|
|
chr1
|
223363018
|
223363930
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872962
|
|
|
chr1
|
223363030
|
223365378
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872963
|
|
|
chr1
|
223363129
|
223365074
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107872964
|
|
|
chr1
|
223363133
|
223363499
|
MYOD
|
GTRD
|
no
|
Muscle (Myoblast)
|
21383490
|
|
|
chr1
|
223363310
|
223363330
|
TBX19
|
JASPAR
|
yes
|
|
35646977
|
|
|
chr1
|
223363316
|
223363328
|
PKNOX2
|
JASPAR
|
yes
|
|
35646978
|
|
|
chr1
|
223363318
|
223363328
|
MAX
|
JASPAR
|
yes
|
|
35646979
|
|
|
chr1
|
223363320
|
223363330
|
TBR1
|
JASPAR
|
yes
|
|
35646980
|
|
Genes associated with rs539599107[chr1:223363321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |