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- rs539706841[chr17:78149236]
Enhancers that have rs539706841[chr17:78149236]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78147325 |
78151475 |
enh17429 |
|
|
Transcript factors that have rs539706841[chr17:78149236]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
78148371
|
78149336
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306334
|
|
|
chr17
|
78148372
|
78149330
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306335
|
|
|
chr17
|
78148398
|
78149291
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306336
|
|
|
chr17
|
78148642
|
78149465
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306337
|
|
|
chr17
|
78149174
|
78149610
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108306338
|
|
|
chr17
|
78149189
|
78149765
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21796924
|
|
|
chr17
|
78149189
|
78149765
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108306339
|
|
|
chr17
|
78149200
|
78149584
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21796925
|
|
|
chr17
|
78149200
|
78149584
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108306340
|
|
|
chr17
|
78149207
|
78149663
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21796926
|
|
|
chr17
|
78149207
|
78149663
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108306341
|
|
|
chr17
|
78149208
|
78149468
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21796927
|
|
|
chr17
|
78149208
|
78149468
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108306342
|
|
|
chr17
|
78149232
|
78149238
|
LEF1
|
TRANSFAC
|
yes
|
|
56243567
|
|
|
chr17
|
78149232
|
78149238
|
SOX10
|
JASPAR
|
yes
|
|
56243568
|
|
Genes associated with rs539706841[chr17:78149236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |