EnhancerDB
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  3. rs539798480[chr17:47996339]
Enhancers that have rs539798480[chr17:47996339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47982025 47996675 enh17210
Prostate (PC-3) Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs539798480[chr17:47996339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47996070 47997000 ZNF143 GTRD no Epithelial (MCF-7) 21769279
chr17 47996095 47996896 ZNF143 GTRD no Epithelial (MCF-7) 21769280
chr17 47996102 47996566 ZNF143 GTRD no Epithelial (MCF-7) 21769281
chr17 47996113 47996688 ZNF143 GTRD no Epithelial (MCF-7) 21769282
chr17 47996167 47996776 ZNF143 GTRD no Epithelial (MCF-7) 21769283
chr17 47996230 47996628 ZNF143 GTRD no Epithelial (MCF-7) 21769284
chr17 47996321 47996342 IRF1 JASPAR yes 54669898
chr17 47996321 47996342 ZNF263 JASPAR yes 54669899
chr17 47996322 47996343 IRF1 JASPAR yes 54669900
chr17 47996324 47996339 PRDM1 JASPAR yes 54669902
chr17 47996326 47996347 IRF1 JASPAR yes 54669903
chr17 47996327 47996342 FOXP1 JASPAR yes 54669904
chr17 47996327 47996348 IRF1 JASPAR yes 54669905
chr17 47996328 47996349 IRF1 JASPAR yes 54669906
chr17 47996332 47996353 IRF1 JASPAR yes 54669907
chr17 47996333 47996348 FOXP1 JASPAR yes 54669908
chr17 47996333 47996354 IRF1 JASPAR yes 54669909
chr17 47996337 47996358 IRF1 JASPAR yes 54669910
chr17 47996338 47996353 FOXP1 JASPAR yes 54669911
Genes associated with rs539798480[chr17:47996339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More