EnhancerDB
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  3. rs539843535[chr6:37032088]
Enhancers that have rs539843535[chr6:37032088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37012585 37032515 enh23198
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539843535[chr6:37032088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37032073 37032088 FOXP1 JASPAR yes 101381329
chr6 37032073 37032094 IRF1 JASPAR yes 101381330
chr6 37032074 37032089 FOXP1 JASPAR yes 101381331
chr6 37032074 37032095 IRF1 JASPAR yes 101381332
chr6 37032075 37032090 FOXP1 JASPAR yes 101381333
chr6 37032075 37032096 IRF1 JASPAR yes 101381334
chr6 37032076 37032091 FOXP1 JASPAR yes 101381335
chr6 37032077 37032092 FOXP1 JASPAR yes 101381336
chr6 37032077 37032098 IRF1 JASPAR yes 101381337
chr6 37032078 37032093 FOXP1 JASPAR yes 101381338
chr6 37032078 37032099 IRF1 JASPAR yes 101381339
chr6 37032079 37032094 FOXP1 JASPAR yes 101381340
Genes associated with rs539843535[chr6:37032088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More