EnhancerDB
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Enhancers that have rs539855606[chr17:41323880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41320999 41326475 enh102568
Bone (Osteoblast)
Transcript factors that have rs539855606[chr17:41323880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41321698 41325012 ZBTB33 GTRD no Lung (A549) 108261143
chr17 41322814 41324801 ZBTB33 GTRD no Lung (A549) 108261144
chr17 41322943 41325056 ZNF143 GTRD no Epithelial (MCF-7) 108261145
chr17 41323543 41324833 ZNF143 GTRD no Epithelial (MCF-7) 108261146
chr17 41323581 41324822 TCF7L2 GTRD no Colon (HCT116) 108261147
chr17 41323624 41324953 ZNF143 GTRD no Epithelial (MCF-7) 108261148
chr17 41323708 41324787 ZNF274 GTRD no Cervix (HeLa-S3) 108261149
chr17 41323736 41324777 ZNF143 GTRD no Epithelial (MCF-7) 108261150
chr17 41323746 41325643 TCF7L2 GTRD no Colon (HCT116) 108261151
chr17 41323754 41324674 TCF7L2 GTRD no Colon (HCT116) 108261152
chr17 41323771 41324817 ZNF143 GTRD no Epithelial (MCF-7) 108261153
chr17 41323808 41324581 TCF7L2 GTRD no Colon (HCT116) 108261154
chr17 41323816 41324880 ZBTB33 GTRD no Lung (A549) 108261155
chr17 41323816 41325827 TCF7L2 GTRD no Colon (HCT116) 108261156
chr17 41323840 41324324 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261157
chr17 41323874 41324511 ZBTB33 GTRD no Lung (A549) 108261158
chr17 41323875 41323893 RARA JASPAR yes 54329844
chr17 41323879 41323890 NRL JASPAR yes 54329845
Genes associated with rs539855606[chr17:41323880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More