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- rs539892167[chr12:52433878]
Enhancers that have rs539892167[chr12:52433878]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52433623 |
52433924 |
vista13436 |
|
|
Transcript factors that have rs539892167[chr12:52433878]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52433584
|
52434614
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108033004
|
|
|
chr12
|
52433679
|
52434628
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108033005
|
|
|
chr12
|
52433755
|
52434588
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108033006
|
|
|
chr12
|
52433771
|
52434080
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108033007
|
|
|
chr12
|
52433826
|
52434608
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108033008
|
|
|
chr12
|
52433843
|
52434582
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108033009
|
|
|
chr12
|
52433865
|
52433878
|
NR2F1
|
JASPAR
|
yes
|
|
82405245
|
|
|
chr12
|
52433867
|
52433878
|
ESRRA
|
JASPAR
|
yes
|
|
82405246
|
|
|
chr12
|
52433867
|
52433878
|
ESRRB
|
JASPAR
|
yes
|
|
82405247
|
|
|
chr12
|
52433869
|
52433879
|
RORA
|
JASPAR
|
yes
|
|
82405249
|
|
Genes associated with rs539892167[chr12:52433878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |