Enhancers that have rs539969456[chr11:1846539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 1845929 1854335 enh62113
chr11 1846340 1846557 vista9367

Transcript factors that have rs539969456[chr11:1846539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 1845347 1846540 TCF7L2 GTRD no Colon (HCT116) 107951899
chr11 1845379 1846678 ZNF274 GTRD no Blood (GM12878) 107951900
chr11 1845821 1846585 TCF7L2 GTRD no Colon (HCT116) 107951904
chr11 1846068 1846668 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951906
chr11 1846097 1846767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951907
chr11 1846124 1846701 CTCF UCSC Txn Factor no Conserved 107951908
chr11 1846132 1846602 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107951909
chr11 1846140 1846636 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951910
chr11 1846180 1846616 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951912
chr11 1846194 1846584 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951913
chr11 1846196 1846552 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951915
chr11 1846198 1846574 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951916
chr11 1846207 1846577 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951917
chr11 1846218 1846554 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951919
chr11 1846219 1846555 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107951920
chr11 1846230 1846591 RAD21 UCSC Txn Factor no Conserved 107951921
chr11 1846232 1846576 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951923
chr11 1846245 1846545 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951925
chr11 1846247 1846647 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951927
chr11 1846249 1846563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951928
chr11 1846249 1846649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951929
chr11 1846267 1846557 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951936
chr11 1846271 1846541 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951937
chr11 1846271 1846547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107951938
chr11 1846277 1846553 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951942
chr11 1846282 1846591 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951944
chr11 1846292 1846582 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107951946
chr11 1846335 1846579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107951948
chr11 1846526 1846540 RXRB JASPAR yes 36971493
chr11 1846526 1846540 RXRG JASPAR yes 36971494
chr11 1846526 1846540 RXRB JASPAR yes 114028736
chr11 1846526 1846540 RXRG JASPAR yes 114028737
chr11 1846526 1846541 NR2C2 JASPAR yes 36971495
chr11 1846526 1846541 NR2C2 JASPAR yes 114028738

Genes associated with rs539969456[chr11:1846539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More