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- rs539990205[chr17:72104616]
Enhancers that have rs539990205[chr17:72104616]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
72104481 |
72104726 |
vista25887 |
|
|
Transcript factors that have rs539990205[chr17:72104616]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
72104169
|
72104833
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108291383
|
|
|
chr17
|
72104608
|
72104622
|
PLAG1
|
JASPAR
|
yes
|
|
21291502
|
|
|
chr17
|
72104610
|
72104625
|
TFAP2A
|
JASPAR
|
yes
|
|
21291504
|
|
|
chr17
|
72104610
|
72104625
|
TFAP2C
|
JASPAR
|
yes
|
|
21291505
|
|
|
chr17
|
72104611
|
72104622
|
TFAP2A
|
JASPAR
|
yes
|
|
21291506
|
|
|
chr17
|
72104611
|
72104623
|
INSM1
|
JASPAR
|
yes
|
|
21291507
|
|
|
chr17
|
72104612
|
72104621
|
TFAP2A
|
JASPAR
|
yes
|
|
21291508
|
|
Genes associated with rs539990205[chr17:72104616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |