EnhancerDB
  1. Home
  2. SNP
  3. rs540054790[chr19:6577122]
Enhancers that have rs540054790[chr19:6577122]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs540054790[chr19:6577122]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575515 6578247 ZNF274 GTRD no Bone Marrow (K562) 21845802
chr19 6575515 6578247 ZNF274 GTRD no Bone Marrow (K562) 108378567
chr19 6575698 6579375 ZNF274 GTRD no Blood (GM12878) 108378568
chr19 6575808 6579342 ZNF274 GTRD no Blood (GM12878) 108378569
chr19 6575965 6578171 P63 GTRD no Skin (Keratinocyte) 108378570
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6575993 6579348 ZNF274 GTRD no Blood (GM12878) 108378573
chr19 6576419 6577973 ZNF274 GTRD no Cervix (HeLa-S3) 21845805
chr19 6576419 6577973 ZNF274 GTRD no Cervix (HeLa-S3) 108378574
chr19 6576422 6578019 ZNF274 GTRD no Cervix (HeLa-S3) 21845806
chr19 6576422 6578019 ZNF274 GTRD no Cervix (HeLa-S3) 108378575
chr19 6576431 6578006 ZNF274 GTRD no Cervix (HeLa-S3) 21845807
chr19 6576431 6578006 ZNF274 GTRD no Cervix (HeLa-S3) 108378576
chr19 6576446 6578244 ZNF274 GTRD no Cervix (HeLa-S3) 21845808
chr19 6576446 6578244 ZNF274 GTRD no Cervix (HeLa-S3) 108378577
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378578
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378579
chr19 6576662 6578360 ZNF274 GTRD no Blood (GM12878) 108378580
chr19 6576682 6577798 ZNF274 GTRD no Bone Marrow (K562) 21845809
chr19 6576682 6577798 ZNF274 GTRD no Bone Marrow (K562) 108378581
chr19 6576688 6577897 ZNF274 GTRD no Bone Marrow (K562) 21845810
chr19 6576688 6577897 ZNF274 GTRD no Bone Marrow (K562) 108378582
chr19 6576705 6577940 ZNF274 GTRD no Bone Marrow (K562) 21845811
chr19 6576705 6577940 ZNF274 GTRD no Bone Marrow (K562) 108378583
chr19 6576714 6578294 ZNF274 GTRD no Blood (GM12878) 108378584
chr19 6576715 6577245 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845812
chr19 6576719 6578248 ZNF274 GTRD no Blood (GM12878) 108378585
chr19 6576727 6578624 ZNF274 GTRD no Blood (GM12878) 108378586
chr19 6576743 6578345 ZNF274 GTRD no Blood (GM12878) 108378587
chr19 6576744 6578608 ZNF274 GTRD no Blood (GM12878) 108378588
chr19 6576766 6578105 ZNF274 GTRD no Cervix (HeLa-S3) 21845813
chr19 6576766 6578105 ZNF274 GTRD no Cervix (HeLa-S3) 108378589
chr19 6576782 6578376 ZNF274 GTRD no Blood (GM12878) 108378590
chr19 6576787 6577263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845814
chr19 6576789 6577680 ZNF274 GTRD no Bone Marrow (K562) 21845815
chr19 6576789 6577680 ZNF274 GTRD no Bone Marrow (K562) 108378591
chr19 6576790 6577775 ZNF274 GTRD no Cervix (HeLa-S3) 21845816
chr19 6576790 6577775 ZNF274 GTRD no Cervix (HeLa-S3) 108378592
chr19 6576790 6578347 ZNF274 GTRD no Blood (GM12878) 108378593
chr19 6576792 6577496 ZNF274 GTRD no Bone Marrow (K562) 21845817
chr19 6576792 6577496 ZNF274 GTRD no Bone Marrow (K562) 108378594
chr19 6576796 6577873 ZBTB33 GTRD no Lung (A549) 108378595
chr19 6576803 6578351 ZNF274 GTRD no Blood (GM12878) 108378596
chr19 6576805 6578338 ZNF274 GTRD no Blood (GM12878) 108378597
chr19 6576807 6577720 ZNF274 GTRD no Bone Marrow (K562) 21845818
chr19 6576807 6577720 ZNF274 GTRD no Bone Marrow (K562) 108378598
chr19 6576816 6577333 ZNF274 GTRD no Bone Marrow (K562) 21845819
chr19 6576816 6577946 ZNF274 GTRD no Bone Marrow (K562) 21845820
chr19 6576816 6577946 ZNF274 GTRD no Bone Marrow (K562) 108378599
chr19 6576817 6577771 ZNF274 GTRD no Bone Marrow (K562) 21845821
chr19 6576817 6577771 ZNF274 GTRD no Bone Marrow (K562) 108378600
chr19 6576818 6577123 ZNF274 GTRD no Bone Marrow (K562) 21845822
chr19 6576832 6578120 ZNF274 GTRD no Cervix (HeLa-S3) 21845823
chr19 6576832 6578120 ZNF274 GTRD no Cervix (HeLa-S3) 108378601
chr19 6576832 6578140 ZNF274 GTRD no Bone Marrow (K562) 21845824
chr19 6576832 6578140 ZNF274 GTRD no Bone Marrow (K562) 108378602
chr19 6576832 6578702 ZNF274 GTRD no Blood (GM12878) 108378603
chr19 6576846 6578104 P63 GTRD no Skin (Keratinocyte) 108378604
chr19 6576852 6577182 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845825
chr19 6576857 6577906 TCF7L2 GTRD no Colon (HCT116) 21845826
chr19 6576857 6577906 TCF7L2 GTRD no Colon (HCT116) 108378605
chr19 6576858 6577360 ZNF274 GTRD no Bone Marrow (K562) 21845827
chr19 6576860 6577679 ZNF274 GTRD no Bone Marrow (K562) 21845828
chr19 6576860 6577679 ZNF274 GTRD no Bone Marrow (K562) 108378606
chr19 6576881 6577281 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845830
chr19 6576883 6577772 ZNF274 GTRD no Cervix (HeLa-S3) 21845831
chr19 6576883 6577772 ZNF274 GTRD no Cervix (HeLa-S3) 108378607
chr19 6576890 6577254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845832
chr19 6576911 6578113 ZNF274 GTRD no Cervix (HeLa-S3) 21845833
chr19 6576911 6578113 ZNF274 GTRD no Cervix (HeLa-S3) 108378608
chr19 6576913 6578077 ZNF274 GTRD no Cervix (HeLa-S3) 21845834
chr19 6576913 6578077 ZNF274 GTRD no Cervix (HeLa-S3) 108378609
chr19 6576916 6577398 ZNF274 GTRD no Bone Marrow (K562) 21845835
chr19 6576938 6577242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845836
chr19 6576939 6577375 ZNF274 GTRD no Bone Marrow (K562) 21845837
chr19 6576939 6577415 ZNF274 GTRD no Bone Marrow (K562) 21845838
chr19 6576974 6578335 ZNF274 GTRD no Blood (GM12878) 108378610
chr19 6576975 6577198 ZNF274 GTRD no Bone Marrow (K562) 21845839
chr19 6576986 6577242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845840
chr19 6576990 6577966 ZNF274 GTRD no Cervix (HeLa-S3) 21845841
chr19 6576990 6577966 ZNF274 GTRD no Cervix (HeLa-S3) 108378611
chr19 6576996 6578106 P63 GTRD no Skin (Keratinocyte) 108378612
chr19 6576997 6578255 ZNF274 GTRD no Blood (GM12878) 108378613
chr19 6577006 6577182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845842
chr19 6577018 6578100 P63 GTRD no Skin (Keratinocyte) 108378614
chr19 6577033 6578330 ZNF274 GTRD no Blood (GM12878) 108378615
chr19 6577043 6578235 ZNF274 GTRD no Blood (GM12878) 108378616
chr19 6577054 6577621 TCF7L2 GTRD no Colon (HCT116) 21845843
chr19 6577054 6577621 TCF7L2 GTRD no Colon (HCT116) 108378617
chr19 6577060 6578171 ZNF274 GTRD no Blood (GM12878) 108378618
chr19 6577063 6578454 ZNF274 GTRD no Blood (GM12878) 108378619
chr19 6577082 6578330 ZNF274 GTRD no Blood (GM12878) 108378620
chr19 6577102 6578480 ZNF274 GTRD no Blood (GM12878) 108378621
chr19 6577108 6577699 ZBTB33 GTRD no Lung (A549) 108378622
chr19 6577112 6577127 NR2C2 JASPAR yes 112277672
chr19 6577112 6578282 ZNF274 GTRD no Blood (GM12878) 108378623
chr19 6577115 6577125 SP1 JASPAR yes 112277673
chr19 6577116 6577126 SP1 JASPAR yes 112277674
chr19 6577118 6577124 NFE2 TRANSFAC yes 112277675
chr19 6577118 6578696 ZNF274 GTRD no Blood (GM12878) 108378624
chr19 6577120 6578331 ZNF274 GTRD no Blood (GM12878) 108378625
chr19 6577121 6577132 EBF1 JASPAR yes 112277676
Genes associated with rs540054790[chr19:6577122], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More