EnhancerDB
  1. Home
  2. SNP
  3. rs540057199[chr15:40394555]
Enhancers that have rs540057199[chr15:40394555]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540057199[chr15:40394555]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40394552 40394557 TFAP2A TRANSFAC yes 22929786
chr15 40394552 40394558 MZF1 JASPAR yes 22929787
Genes associated with rs540057199[chr15:40394555], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More