EnhancerDB
  1. Home
  2. SNP
  3. rs540101197[chr6:37027213]
Enhancers that have rs540101197[chr6:37027213]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37012585 37032515 enh23198
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540101197[chr6:37027213]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37027213 37027224 NFKB1 JASPAR yes 101380560
chr6 37027213 37027226 NFKB2 JASPAR yes 101380561
Genes associated with rs540101197[chr6:37027213], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More