EnhancerDB
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  3. rs540130661[chr17:62803794]
Enhancers that have rs540130661[chr17:62803794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62800825 62808655 enh4530
Prostate (PC-3) Prostate (RWPE1) Blood (Karpas-422) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs540130661[chr17:62803794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62797288 62805914 ZNF143 GTRD no Epithelial (MCF-7) 21779852
chr17 62798319 62805711 ZNF143 GTRD no Epithelial (MCF-7) 21779853
chr17 62802134 62804394 ZNF143 GTRD no Epithelial (MCF-7) 21779875
chr17 62803175 62805951 ZNF143 GTRD no Epithelial (MCF-7) 21779878
chr17 62803265 62805675 ZNF143 GTRD no Epithelial (MCF-7) 21779879
chr17 62803353 62805903 ZNF143 GTRD no Epithelial (MCF-7) 21779880
chr17 62803415 62805173 ZNF143 GTRD no Epithelial (MCF-7) 21779881
chr17 62803525 62810216 ZNF143 GTRD no Epithelial (MCF-7) 21779882
chr17 62803525 62810216 ZNF143 GTRD no Epithelial (MCF-7) 21779883
chr17 62803613 62805904 ZNF143 GTRD no Epithelial (MCF-7) 21779884
chr17 62803650 62810706 ZNF143 GTRD no Epithelial (MCF-7) 21779885
chr17 62803650 62810706 ZNF143 GTRD no Epithelial (MCF-7) 21779886
chr17 62803697 62805849 ZNF143 GTRD no Epithelial (MCF-7) 21779887
chr17 62803787 62803802 SCRT1 JASPAR yes 55326259
chr17 62803791 62803800 SNAI2 JASPAR yes 55326260
chr17 62803791 62803801 ID4 JASPAR yes 55326261
chr17 62803791 62803801 TCF3 JASPAR yes 55326262
chr17 62803791 62803801 TCF4 JASPAR yes 55326263
Genes associated with rs540130661[chr17:62803794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More