EnhancerDB
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  3. rs540176472[chr6:42740204]
Enhancers that have rs540176472[chr6:42740204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
Transcript factors that have rs540176472[chr6:42740204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42740194 42740205 FOXA1 JASPAR yes 101740566
chr6 42740202 42740220 ESR2 JASPAR yes 101740567
chr6 42740204 42740214 SP1 JASPAR yes 101740568
Genes associated with rs540176472[chr6:42740204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More