-
Home
- SNP
- rs540222860[chr17:65330694]
Enhancers that have rs540222860[chr17:65330694]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
65328445 |
65333175 |
enh52559 |
|
|
Transcript factors that have rs540222860[chr17:65330694]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
65330345
|
65330725
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21782043
|
|
|
chr17
|
65330683
|
65330698
|
FOXP1
|
JASPAR
|
yes
|
|
55493795
|
|
|
chr17
|
65330684
|
65330695
|
HOXC12
|
JASPAR
|
yes
|
|
55493796
|
|
|
chr17
|
65330685
|
65330695
|
HOXC10
|
JASPAR
|
yes
|
|
55493797
|
|
|
chr17
|
65330685
|
65330695
|
HOXD11
|
JASPAR
|
yes
|
|
55493798
|
|
|
chr17
|
65330685
|
65330706
|
IRF1
|
JASPAR
|
yes
|
|
55493799
|
|
|
chr17
|
65330686
|
65330707
|
IRF1
|
JASPAR
|
yes
|
|
55493800
|
|
|
chr17
|
65330689
|
65330695
|
TBP
|
TRANSFAC
|
yes
|
|
55493801
|
|
|
chr17
|
65330689
|
65330704
|
FOXP1
|
JASPAR
|
yes
|
|
55493802
|
|
|
chr17
|
65330690
|
65330705
|
STAT2
|
JASPAR
|
yes
|
|
55493803
|
|
|
chr17
|
65330691
|
65330706
|
FOXP1
|
JASPAR
|
yes
|
|
55493804
|
|
|
chr17
|
65330691
|
65330712
|
IRF1
|
JASPAR
|
yes
|
|
55493805
|
|
|
chr17
|
65330692
|
65330713
|
IRF1
|
JASPAR
|
yes
|
|
55493806
|
|
|
chr17
|
65330693
|
65330705
|
FOXC2
|
JASPAR
|
yes
|
|
55493807
|
|
|
chr17
|
65330693
|
65330713
|
RREB1
|
JASPAR
|
yes
|
|
55493808
|
|
|
chr17
|
65330694
|
65330705
|
FOXP2
|
JASPAR
|
yes
|
|
55493809
|
|
Genes associated with rs540222860[chr17:65330694], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |