EnhancerDB
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  3. rs540271685[chr17:47956438]
Enhancers that have rs540271685[chr17:47956438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47955625 47981555 enh17209
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Ovary Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs540271685[chr17:47956438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47954877 47959727 ZNF143 GTRD no Epithelial (MCF-7) 21768906
chr17 47955011 47959236 ZNF143 GTRD no Epithelial (MCF-7) 21768907
chr17 47955104 47959177 ZNF143 GTRD no Epithelial (MCF-7) 21768908
chr17 47955106 47959752 ZNF143 GTRD no Epithelial (MCF-7) 21768909
chr17 47955122 47959325 ZNF143 GTRD no Epithelial (MCF-7) 21768910
chr17 47955254 47956618 ZNF143 GTRD no Epithelial (MCF-7) 21768913
chr17 47955261 47958598 ZNF143 GTRD no Epithelial (MCF-7) 21768914
chr17 47955319 47958749 ZNF143 GTRD no Epithelial (MCF-7) 21768919
chr17 47955320 47958875 ZNF143 GTRD no Epithelial (MCF-7) 21768920
chr17 47955499 47958759 ZNF143 GTRD no Epithelial (MCF-7) 21768928
chr17 47955538 47958324 ZNF274 GTRD no Liver (HepG2) 21768929
chr17 47955736 47958957 ZNF143 GTRD no Epithelial (MCF-7) 21768930
chr17 47955829 47958747 ZNF143 GTRD no Epithelial (MCF-7) 21768931
chr17 47956258 47958344 ZNF274 GTRD no Liver (HepG2) 21768933
chr17 47956379 47957276 ZNF143 GTRD no Epithelial (MCF-7) 21768934
chr17 47956400 47958016 ZNF274 GTRD no Liver (HepG2) 21768935
chr17 47956419 47958660 ZNF143 GTRD no Epithelial (MCF-7) 21768936
Genes associated with rs540271685[chr17:47956438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More