EnhancerDB
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  3. rs540284823[chr17:2627501]
Enhancers that have rs540284823[chr17:2627501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2623914 2630427 enh86233
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC)
chr17 2627139 2627523 vista23728
VISTA
Transcript factors that have rs540284823[chr17:2627501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2626415 2627610 ZNF143 GTRD no Epithelial (MCF-7) 108231030
chr17 2626415 2627610 ZNF143 GTRD no Epithelial (MCF-7) 108231031
chr17 2626418 2627706 ZNF143 GTRD no Epithelial (MCF-7) 108231032
chr17 2626418 2627706 ZNF143 GTRD no Epithelial (MCF-7) 108231033
chr17 2626418 2627706 ZNF143 GTRD no Epithelial (MCF-7) 108231034
chr17 2626431 2627529 ZNF143 GTRD no Epithelial (MCF-7) 108231035
chr17 2626431 2627529 ZNF143 GTRD no Epithelial (MCF-7) 108231036
chr17 2626456 2627516 ZNF143 GTRD no Epithelial (MCF-7) 108231037
chr17 2626456 2627516 ZNF143 GTRD no Epithelial (MCF-7) 108231038
chr17 2626478 2627635 ZNF143 GTRD no Epithelial (MCF-7) 108231039
chr17 2626478 2627635 ZNF143 GTRD no Epithelial (MCF-7) 108231040
chr17 2626478 2627635 ZNF143 GTRD no Epithelial (MCF-7) 108231041
chr17 2626593 2627508 ZNF143 GTRD no Epithelial (MCF-7) 108231052
chr17 2626593 2627508 ZNF143 GTRD no Epithelial (MCF-7) 108231053
chr17 2627208 2628382 POLR2A UCSC Txn Factor no Conserved 108231076
chr17 2627208 2628382 POLR2A UCSC Txn Factor no Conserved 108231077
chr17 2627210 2627674 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21739691
chr17 2627210 2627674 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231078
chr17 2627210 2627674 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231079
chr17 2627217 2627767 TCF7L2 UCSC Txn Factor no Conserved 108231080
chr17 2627217 2627767 TCF7L2 UCSC Txn Factor no Conserved 108231081
chr17 2627274 2627769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231082
chr17 2627274 2627769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231083
chr17 2627318 2627628 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21739692
chr17 2627318 2627628 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231084
chr17 2627318 2627628 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231085
chr17 2627322 2627626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231086
chr17 2627322 2627626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231087
chr17 2627327 2627643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108231088
chr17 2627327 2627643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108231089
chr17 2627341 2627621 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21739693
chr17 2627341 2627621 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231090
chr17 2627341 2627621 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231091
chr17 2627349 2627679 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21739694
chr17 2627349 2627679 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231092
chr17 2627349 2627679 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231093
chr17 2627354 2627730 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21739695
chr17 2627354 2627730 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231094
chr17 2627354 2627730 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231095
chr17 2627365 2627637 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231096
chr17 2627365 2627637 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231097
chr17 2627402 2627758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231098
chr17 2627402 2627758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231099
chr17 2627473 2627616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108231100
chr17 2627484 2628008 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21739696
chr17 2627484 2628008 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231101
chr17 2627484 2628008 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231102
chr17 2627489 2627504 ZBTB33 JASPAR yes 21185114
chr17 2627489 2627504 ZBTB33 JASPAR yes 52768923
chr17 2627492 2627507 ZBTB33 JASPAR yes 21185115
chr17 2627492 2627507 ZBTB33 JASPAR yes 52768924
chr17 2627494 2627505 E2F1 JASPAR yes 21185116
chr17 2627494 2627505 E2F1 JASPAR yes 52768925
Genes associated with rs540284823[chr17:2627501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More